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Plant Cell: 拟南芥细胞糖素CYP18-1促进PRP18去磷酸化,并在热应激下保持内含子的剪接

 PaperRSS 2022-03-11

在植物中,热应激诱导选择性剪接的变化,包括内含子保留;这些事件可以迅速改变蛋白质或下调蛋白质活性,产生非功能性亚型或诱导无义介导的mRNA衰变。亲核环素(CYPs)是多细胞真核生物剪接体复合体中的辅助蛋白。然而,植物CYPs是否参与前体mRNA剪接仍不清楚。在这里,我们发现拟南芥CYP18-1对于有效去除内含子是必需的,内含子是在萌发过程中因热应激而保留的。CYP18-1与第二步剪接因子(PRP18a、PRP22和SMP1)相互作用,并与热应激时的U2和U5小核RNA相关。CYP18-1与磷酸化PRP18a结合,CYP18-1浓度的增加与PRP18a去磷酸化的增加有关。此外,相互作用和原生质体转染实验显示,CYP18-1和PP2A型磷酸酶PP2A BʹȠ共同调节PRP18a去磷酸化。热应激下,qpr-RNA剪接和qprt-seqns是必需的。总的来说,我们揭示了CYP18-1激活PRP18去磷酸化的作用机制,并表明CYP18-1对于植物中保留内含子的有效剪接和对热应激的快速反应至关重要。

In plants, heat stress induces changes in alternative splicing, including intron retention; these events can rapidly alter proteins or downregulate protein activity, producing non-functional isoforms or inducing nonsense-mediated decay of mRNA. Nuclear cyclophilins (CYPs) are accessory proteins in the spliceosome complexes of multicellular eukaryotes. However, whether plant CYPs are involved in pre-mRNA splicing remains unknown. Here, we found that Arabidopsis thaliana CYP18-1 is necessary for the efficient removal of introns that are retained in response to heat stress during germination. CYP18-1 interacts with step II splicing factors (PRP18a, PRP22, and SMP1) and associates with the U2 and U5 small nuclear RNAs in response to heat stress. CYP18-1 binds to phospho-PRP18a, and increasing concentrations of CYP18-1 are associated with increasing dephosphorylation of PRP18a. Furthermore, interaction and protoplast transfection assays revealed that CYP18-1 and the PP2A-type phosphatase PP2A BʹȠ co-regulate PRP18a dephosphorylation. RNA-seq and RT-qPCR analysis confirmed that CYP18-1 is essential for splicing introns that are retained under heat stress. Overall, we reveal the mechanism of action by which CYP18-1 activates the dephosphorylation of PRP18 and show that CYP18-1 is crucial for the efficient splicing of retained introns and rapid responses to heat stress in plants.

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