看起来似乎是Agilent和CBC公司合作,所以芯片平台是:Agilent-038314 CBC Homo sapiens lncRNA + mRNA microarray V2.0 (Feature Number version) ,从有表达差异的基因列表里面筛选到最后的3个lncRNA组成的食管癌诊断分类器基因集,过程比较复杂,如下:有趣的是,这篇文章的数据非常多,还有个:https://www.ncbi.nlm./geo/query/acc.cgi?acc=GSE53622所以很多数据挖掘文章重新分析了它,比如:
Immune signature profiling identified predictive and prognostic factors for esophageal squamous cell carcinoma. Oncoimmunology 2017;6(11):e1356147. PMID: 29147607
AJUBA promotes the migration and invasion of esophageal squamous cell carcinoma cells through upregulation of MMP10 and MMP13 expression. Oncotarget 2016 Jun 14;7(24):36407-36418. PMID: 27172796